Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVELWQQCVDLLRDELPSQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGERGEGQLPALSLLIGSKRSRTPRAAIVPSQTHVAPPPPVAPPPAPVQPVSAAPVVVPREELPPVTTAPSVSSDPYEPEEPSIDPLAAAMPAGAAPAVRTERNVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNLKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFY-RSVDALLIDDIQFFARKER---SQEEFFHTFNAL---LEGGQQVILTSDRYPKEIEGLEERLK--SRFGWGLTVAVEPPELETRVAILMKKAEQAKIELPHDAAFFIAQRIRSNV-RELEGALKRVIAHSHFMG-RPITIELIRESLKDLLALQDKLVSIDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGVAFGGRDHTTVLHACRKIAQLRESDADIREDYKNLLRTLTT |
1IXZ Chain:A ((48-252)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPKGVLLVGPPGVGKTHLARAVAGEAR-----VPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGR---NDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDI---LDPALLRPGRF--DRQIAIDAPDVKGREQILRIHARGKPL-AEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98383 for 1387 contacts (-70.9/contact) +
2D Compatibility (PS) -19924 + (NN) -13280 + (LL) 21732
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: -117505.0 ( -84.72 by residue)
QMean score : 0.486
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