Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIAISGGGTGGHIYPALAFIKEVQRRHPNVEFLYIGTENGLEKKIVERENIPFRSIEITGFKRKLSFENVKTVMRFLKGVKKSKSYLAEFKPDAVIGTG-GYVCGPVVYAAAKMGIPTIVHEQNSLPGITNKFLSKYVNKVAICFEEAKSHFPSE--------------KVVFTGNPRASEVVSIKTGRSLAEF-GLSEDKKTVLIFGGSRGAAPINRAVIDMQDVLKTRDYQVLYITGEVHYEKVMNELKSKGAADNMVTKPFLHQMPEYLKAIDVIVARAGATTIAEITALGIPSVLIPSPYVTANHQEVNARSLGQHDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYSVLEELKK--
1F0K Chain:A ((7-357))KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGG-YVSGPGGLAAWSLGIPVVLHEQNGIAG------------------LTNKWLAK-IATKVMQAFPGAFPNAEVVGNPVRTDVLALPL---PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG-DSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVT-EFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQH-KDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVSRVARAL


General information:
TITO was launched using:
RESULT:

Template: 1F0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1885 -208313 -110.51 -625.56
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -110.51
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_1F0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F0K-query.scw
PDB file : Tito_Scwrl_1F0K.pdb: