Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN-CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY |
| 4AU8 Chain:A ((12-293)) | ------------------------EKIGEGTYGTVFKAKNRE--THEIVALKRV-----PSSALREICLLKELKHKNIVRLHDVLH-----KLTLVFEFCDQDLKKYFDSC-----N---GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR----NGELKLADFGLARAFGIPVR-----SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---------DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP------MYPATTSLVN----VVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180528 for 2158 contacts (-83.7/contact) +
2D Compatibility (PS) -28030 + (NN) -10094 + (LL) 5284
1D Compatibility (HY) -27200 + (ID) 5650
Total energy: -246218.0 ( -114.10 by residue)
QMean score : 0.497
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