Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVML---------DIFYPELITIGSNSVIGYNVTILTHEA------------------L------VDEFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
1MR7 Chain:A ((27-167))
----------------------------------------------------LENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQR-
General information:
TITO was launched using:
RESULT:
Template:
1MR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68048 for 772 contacts (-88.1/contact) +
2D Compatibility (PS) -11465 + (NN) -508 + (LL) 5064
1D Compatibility (HY) -1200 + (ID) 1850
Total energy: -78007.0 ( -101.05 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1MR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MR7-query.scw
PDB file :
Tito_Scwrl_1MR7.pdb
: