Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFNKLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITYEFENISAQQLKLLCE-KYNIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKESTDIDKAIETLGYPFIVKTRFGG-YDGKGQVLINNEKDLQEGFKLI--ETSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQENEHRNQILFKTIVPARIDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVTGQSLPNSIELLKPAVMMNLL-GK-DLDLLENEFNEHPEWHLHIYGKSGRKDSRKMGHMTVLTNDVNQTEQDMYAKFEGSN |
| 3Q2O Chain:A ((11-379)) | -----ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAYLP-QGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQEQLTEAIAELSYPSVLKTTT-GGYDGKGQVVLRSEADVD--EARKLANAAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAENIHVNNILHESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICNLPLGET-NLLKPVVMVNILGEHIEGVLR--QVNRLTGCYLHLYGKEEAKAQRKMGHVNILNDNIEVALEKAKSLHIWD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131710 for 3096 contacts (-42.5/contact) +
2D Compatibility (PS) -40226 + (NN) -21940 + (LL) 12
1D Compatibility (HY) -26000 + (ID) 7550
Total energy: -227414.0 ( -73.45 by residue)
QMean score : 0.533
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