Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANAT-GRSYIYHQKALHPIPEGSVMGIPTDKEALLASTLVSEIGKARALQE-PTMERNNQERDQALGDFFEARFGKELVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLK-ESSMQTTG----TKATIGAFRTLEGGLDALPKAIAAALPKENLHTAKQATEIVKKNN------AYEISFA-----DGDKMEADGVIIAATHDALIHLLA--ETTT---EPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAP---YKTTACTWVQKKWPHMVPKNKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEIMDLHAAPLFYEVSRMKSAMPQYLVNHQDRLKQLKKNIKTDYPGVFFAGMSYEGVGIPDCIAGAQTAAKELVDYLEEV |
| 1SEZ Chain:A ((13-494)) | AKRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSN--------PIDLIKSNFLSTGSKLQMLLEPILW------SHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLS----KTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKN-LPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220194 for 3737 contacts (-58.9/contact) +
2D Compatibility (PS) -46389 + (NN) -8398 + (LL) 684
1D Compatibility (HY) -25200 + (ID) 5400
Total energy: -304897.0 ( -81.59 by residue)
QMean score : 0.472
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