Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKARITALLHDYAKYYDDDKARKIIED-EGYDPRLLSFHHSLWHAPVGAYLAEKEFGITD----------TEILEAIRLHTTGSATMSDFD------KLIYLADYTEQGRTFPGVY-------KARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY--- |
| 1YAR Chain:O ((10-237)) | KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41423 for 1250 contacts (-33.1/contact) +
2D Compatibility (PS) -19935 + (NN) -5622 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -70180.0 ( -56.14 by residue)
QMean score : 0.273
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