Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDR---GRIDLVNPEILEKSGEQ-TGIEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
4DR8 Chain:A ((16-170))KPPLDLHYLGDRVLRQPAKRVSRIDDELRQTIRQMLQTMYSADGIGLAAPQVGINKQLIVIDLELEDEQAPPLVLINPKIERTAGDLEQCQEGCLSIPGVYLDVERPEIVEVSYKDENGRPQRLVADGLLARCIQHEMDHLNGVLFVDRVENRLE---------


General information:
TITO was launched using:
RESULT:

Template: 4DR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 722 -67876 -94.01 -449.51
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -94.01
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4DR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DR8-query.scw
PDB file : Tito_Scwrl_4DR8.pdb: