Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTIFEALKWASSYLTEAGREENAAELLLLYDTGMERSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVVFHLLEKY--RSVFSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKEALQVASANAEKLGAN--VRFYQGDLLEPFIKA-----GKKADIIVSNPPYISEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQGAAVKDLILKAFKGAEVEVLKDINGKDRTICALIHKNK
2H00 Chain:A ((5-254))--------VSLNFKDPEAVRALTCTLLREDF------------------------------------------------GLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFGITEIMAEG----------------GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD


General information:
TITO was launched using:
RESULT:

Template: 2H00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 978 -3196 -3.27 -14.79
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -3.27
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.423

(partial model without unconserved sides chains):
PDB file : Tito_2H00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H00-query.scw
PDB file : Tito_Scwrl_2H00.pdb: