Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTP--RQTTADGFEMQFGTNHLGHFALTGLLIDRLLPV-AGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPL-V--AVA-AILAPLMQDAELGALPTLRAATDPA-VRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 4G81 Chain:D ((4-249)) | --------LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-------------ARPTVAPYTAAKGGIKMLTCSMAAEWAQF-NIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDG----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89444 for 2027 contacts (-44.1/contact) +
2D Compatibility (PS) -26486 + (NN) -15427 + (LL) 4624
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: -138433.0 ( -68.29 by residue)
QMean score : 0.400
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