Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADG--SVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYAS-----VAVADEMSSDHPHLGLIDQGDIVASFL--NIDVPLQALSRLPLLSI----------DGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGK------VILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
| 2QCS Chain:B ((66-275)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFIAGETVI-QQGDEGDNFYVIDQGE-MDVYVNNEW---ATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDIL---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93648 for 1242 contacts (-75.4/contact) +
2D Compatibility (PS) -18821 + (NN) 3379 + (LL) 21924
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -93816.0 ( -75.54 by residue)
QMean score : 0.218
|
|
|