Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASP--RIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
4YMZ Chain:A ((2-251))-ARKTIIAGNWKMNLSLKEAVFLAHSIREKIP-SISKDKVSMVFPSTLHLENVSKILE--GSSVIVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGETLSERESGKTLEVLSSQIREGLKGIDSVFFSNLILAYEPVWAIGTGKVATPSQAQEVHSFIRKEISGLFVGASSISESISILYGGSVKPDNIQDLLKEKDIDGGLVGGASQKISSFAGLF---------


General information:
TITO was launched using:
RESULT:

Template: 4YMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162096 for 2105 contacts (-77.0/contact) +
2D Compatibility (PS) -27418 + (NN) -17896 + (LL) 72
1D Compatibility (HY) -21200 + (ID) 4850
Total energy: -233388.0 ( -110.87 by residue)
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_4YMZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMZ-query.scw
PDB file : Tito_Scwrl_4YMZ.pdb: