Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADL---DLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPVG--RIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEIYAVG-VATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGG---------------IKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE |
| 2BGK Chain:A ((11-248)) | -----------TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG-TLLRAEDVADAVAYLAGDES--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119669 for 1791 contacts (-66.8/contact) +
2D Compatibility (PS) -22856 + (NN) -1858 + (LL) 4816
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -156267.0 ( -87.25 by residue)
QMean score : 0.465
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