Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRSSRKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFARARSAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFREMPDDCFASVVIGPAHDLARQWLAGRTRVALADCRELLAQVAWDSVRAA
3QKX Chain:A ((5-188))
-AKTDLAEQIFSATDRLMAREGLNQLSMLKLAKEANVAAGTIYLYFKNKDELLEQFAHRVFSMFMATLEKDFDETKPFFEQYRQMWKNIWYFLQENPTILSNLKQYES-LP--NFKDICK---NIKNCRWDLFCHQAQKAGLLAELSEDILFLLSLKTAINLASDAKFI----LKPEILESVIERSWRAIQK-
General information:
TITO was launched using:
RESULT:
Template:
3QKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97718 for 1231 contacts (-79.4/contact) +
2D Compatibility (PS) -19224 + (NN) -3085 + (LL) 856
1D Compatibility (HY) -9600 + (ID) 1300
Total energy: -130071.0 ( -105.66 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3QKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QKX-query.scw
PDB file :
Tito_Scwrl_3QKX.pdb
: