Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAV---SIDENAVHGSDSEASAAREIAYFFAATEVCERIR
2DXE Chain:A ((6-149))
-ETERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYP-
General information:
TITO was launched using:
RESULT:
Template:
2DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58861 for 1086 contacts (-54.2/contact) +
2D Compatibility (PS) -14897 + (NN) -1693 + (LL) 308
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -92293.0 ( -84.98 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXE-query.scw
PDB file :
Tito_Scwrl_2DXE.pdb
: