Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARR-RVLVMDTGLRRNRFA--RASHGFLGQD-GRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADGFVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWGA-TTFFLNGVF-E-PDAEQMSRLDRRGVTIERE-AVVALGGAR---ADVTLAS-----GRTITLAGLFTQPRTRMASPLAALLG----CEFEDGPSGPFIRTDGMRETSVPGVFACGDAAL-AAGNVAIAVGDGARTGGAAHHSLLFR |
| 2Q0L Chain:A ((1-310)) | ----------------MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFV-ILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDE--YG-SIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185359 for 2468 contacts (-75.1/contact) +
2D Compatibility (PS) -30258 + (NN) -6452 + (LL) 916
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -237703.0 ( -96.31 by residue)
QMean score : 0.460
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