Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAADEPKPKKLKVEAPEALSENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDLENNWM-LVEKARVYYIAGFFLTVSPESVLKVARYA-AENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIARKTQALPKVNSKRQRTVIFTQGRDDTIVA--TGNDVTAFPVLDQNQ---EEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH |
1LIK Chain:A ((15-353)) | ------------------------VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAG-YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGTCAVLINEKERTLCTHLGACGSFR------IPENWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLV-KVALSVANKEHAV----TGATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYGLSQGKTVKQCIMCGNACAQDVIQHVG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185560 for 2759 contacts (-67.3/contact) +
2D Compatibility (PS) -33615 + (NN) -9241 + (LL) 2668
1D Compatibility (HY) -22400 + (ID) 5650
Total energy: -253798.0 ( -91.99 by residue)
QMean score : 0.554
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