Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERTNDSTSTEFFLVGLSAHPKLQTVFFVLILWMYLMILLG---NGVLISVIIFDSHLHTPMYFFLCNLSFLDVCYTSSSVPLILASFLAVKKKVSFSGCMVQMFISFAMGATECMILGTMALDRYVAICYPLRYPVIMSKGAYVAMAAGSWVTGLVDSVVQTAFAMQLPFCANNVIKHFVCEILAILKLACADISINVISMTGSNLIVL-------VIPLLVISISYIFIVATILRIPSTEGKHKAFSTCSAHLTVVII------------FYGTIFFMYAKPESKASVDSGNEDIIEALISLFYGVMTPMLNPLIYSLRNKDVKAA-VKNILCRKNFSDGK |
| 2I36 Chain:A ((37-326)) | --------------------------FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----DFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -235432 for 1958 contacts (-120.2/contact) +
2D Compatibility (PS) -26717 + (NN) 1482 + (LL) 3440
1D Compatibility (HY) -20400 + (ID) 3400
Total energy: -281027.0 ( -143.53 by residue)
QMean score : 0.280
|
|
|