Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFL--LAVMAYDRYTAICHPLRYTNLMSPKICGLM-TAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCS-------DTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGM--------------YYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE |
| 1GZM Chain:A ((46-327)) | -------------------------YMFLLIMLGFPINFLTLYVTVQ----HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT--LGGEIALWSLVVLAIERYVVVCKPM--SNFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ--QESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -218134 for 1972 contacts (-110.6/contact) +
2D Compatibility (PS) -26429 + (NN) -5418 + (LL) 3244
1D Compatibility (HY) -800 + (ID) 800
Total energy: -248337.0 ( -125.93 by residue)
QMean score : 0.173
|
|
|