Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNENNETLTRGFTLMGLFTHNKCSGFFFGVICAVFFMAMIANGVMIFLINIDPHLHTPMYFLLSHLSVIDTLYISTIVPKMLVDYLMGEGTISFIACTAQCFLYMGFMGAEFFLLGL--MAYDRYVAICNPLRYPVLISWRVCWMILASSWFGGALDSFLLTPITMSLPFCASHQINHFFCEAPTMLRLACG-------DKTTYETVMYVCCVAMLLIPFSVVTASYTRILITVHQMTSAEGR---KKAFATCSSHMMVVTL--------FYGAALYTYTLPQSYHTPIKDKVFSAFYTILTPLLNPLIYSLRNRDVMGALKRVVARC |
1HZX Chain:A ((70-313)) | -----------------------------------------------------KLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTW-------------VMALA-CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTI-PAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189331 for 1656 contacts (-114.3/contact) +
2D Compatibility (PS) -22077 + (NN) -1630 + (LL) 5184
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -211104.0 ( -127.48 by residue)
QMean score : 0.200
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