Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKAGNETQISEFLLLGFSEKQELQPFLFGLFLSMYLVT---VLGNLLIILAAISDSCLHTPMYFFLSNLSFVDICFASTMVPKMLVNIQTQSKVITYAGCITQMCFFVLFIVLDSLLLTVMAYDQFVAICHPLHYTVIMSPQLCGLLVLVSWIMSVLNSMLQSLVTLQLSFCTDLEIPHFFCELNEMIHLACSDTFVNNMVMHFAAVLLDGGPLVGILYSYCRIVSSIRAISSTQGKYKALSTCASHLSVVSIFYGTGLGVYLSSTMTQNLHSTAVASVMYTVVTPMLNPFIYSLRNKDIKGALTQFFRGKQ
3PDS Chain:A ((5-203))-----------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFL----PIQMHWYRATHQEAINCYAEE----TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRN


General information:
TITO was launched using:
RESULT:

Template: 3PDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159651 for 1324 contacts (-120.6/contact) +
2D Compatibility (PS) -19603 + (NN) -4750 + (LL) 2988
1D Compatibility (HY) -14400 + (ID) 2350
Total energy: -197766.0 ( -149.37 by residue)
QMean score : 0.102

(partial model without unconserved sides chains):
PDB file : Tito_3PDS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PDS-query.scw
PDB file : Tito_Scwrl_3PDS.pdb: