Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVM-VVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKH-KRNITEMFHVS---KIPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQIKLYA-------TGSRDPSTEVHVRAIKTMTSFIFFFFLYYISSILMTFSYL----MTKYKLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
2Z73 Chain:A ((32-336)) | ---AVYYSLGIFIGICGIIGCGGNGIVIYLFT---KTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMAAS-KKMSHRRAFIMIIFVWLWSVLWAIGPIFGW---G--A--YTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262106 for 2334 contacts (-112.3/contact) +
2D Compatibility (PS) -28809 + (NN) 4811 + (LL) 1220
1D Compatibility (HY) -12400 + (ID) 1900
Total energy: -299184.0 ( -128.19 by residue)
QMean score : 0.212
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