Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFF-GSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISP-S-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ-----ET----VFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSAFT---QPACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI-----NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 2KS9 Chain:A ((33-323)) | ------------------------------------------VLWAAAYTVIVVTSVVGNVVVMWIILA---HKRMRTVTNYFLVNLAFAEASMAAFN-TVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL------SATATKVVICVIWVLALLLAFPQGYYSTTETM---------------PSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFL----PLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215169 for 2026 contacts (-106.2/contact) +
2D Compatibility (PS) -26913 + (NN) -3005 + (LL) 6348
1D Compatibility (HY) -13200 + (ID) 1300
Total energy: -253239.0 ( -124.99 by residue)
QMean score : 0.234
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