Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------DQATETAPSCSTVISNVAACLPFISHTSPSPSGIC---CGGVKNVAGLAKTHDD-----------KMAICNCLKTELANI------KYDPALVAALPKQCSVNINLPPISKNTDCSKVVFGN-PMKY |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAG--------SVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY----LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31490 for 460 contacts (-68.5/contact) +
2D Compatibility (PS) -9933 + (NN) -6962 + (LL) 52
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -51083.0 ( -111.05 by residue)
QMean score : 0.413
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