Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPDIINPNFSVWVNASAGTGKTKILIDRVLRLLLENKRNIFCLTFTNAAANEMESRIHNILSKWAVCSDNELIASLEQLDLSLLLLQHHYPPSHPFLSSQCLTLRSRWPQTKNSEVFNHYLIQARRLFSELENLDLTIQTVHAFCYKLISSFPAEAGIVPNCTLSECKELHSIVFDKLLHNEAVQDSIKFIAAEVDENKLRDLLYTLCIKRSVSANNLEYVKGKLSAPDEIHGLQSEATEQIERLAEILSKGSKRDRNYSKMLDLTSSSFIQVADTRIQKLDSSATRWNDISIENLVKVFLKSESCEKKSISSIITKSTLEKFPGAEQVIENIQNAVFTHVRDINSYQIFKRTSSFLDIFKVYIDLYNSEKSKNALLDYNDIIDLATNLLSNPDYKNWVLFNLDQKIDHILVDEAQDNSISQWKIIANLCDEFFIRNDEKRTLFVVGDVKQSIYRFQGANPHLFNCMQQYFHTKSGGKDWISCQLEKSFRSTPETLTLVDRLFNNFREEISFVDSEIKHIPYRENDQGYVEIWPLLPRCKEEEQQALQIHLMHRKDYIITDRLLAQAIAHKIHNWLNEGRILVAKNRHIEPRDIMILVRQRNMLVDYVISELKKANIPVVGRDYFRIMDYIAVQDLIALTEFLLLPTNDLALANALKSP---LFNFTEDDLFNIAYDR------------KEQSLWER----LQNYSEDIYSKLNDLINLS-HIESPLTLFTHILRTGKKKFAARLGLECFEVLDEFMNLVLQFENPS-----LQAFVQWIKENNPEIKNDMQSERNAVRIMTIHKSKGLQAPIVFLVDTNTVPKNSESIVLDAMGAPFLCGKNNNAYCDQVKREKKLEDYNEYLRLLYVALTRAEDELYILGKEPVQKGSWYDIITKYGEPYEKKYMELHQIFKEKVEVLCVNANYPYIYKKRDYFNIPAVLPPPNLSILFQHSPSPSQYPLLSPQCFDTGIHSFSPLDSSVTHWDDKKRNTWMTDGYTRGLIIHSILQYMPKIEKDRRKNWIGKYLDNINIRKNKDEIYRKILAFNEKYDYLFDLDGKSEITLSGTINGKPVLVRLDKLCITQDKAIIIDYKSHRNVSVSSLNEIKKQMLIYKTLVQEICPNKQVECMVIWVEDLTIQSDF |
| 2IS1 Chain:A ((172-612)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVY-QAYQEACDRAGLVDFAELLLRAHELWLN---KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD-------TGKVMIVGDDDQSIYGWRGAQ---VENIQRFLNDFPGAE---TIRLEQNYRSTSNILSAANALIENNNGRLG------KKLWTDGADGEPISLYCAFNELDE-----------------------ARFVVNRIKTWQDNGGALA---------ECAILYRS-NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIVNRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN-EDLMPLQAFLSHAALEAGEGQAD--TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ-MSLDEGG--------------------RLE---EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167153 for 2962 contacts (-56.4/contact) +
2D Compatibility (PS) -44118 + (NN) -19553 + (LL) 46160
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -207964.0 ( -70.21 by residue)
QMean score : 0.391
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