Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSIGLSEILVVVLVSIIVLDKNKVPVFIDLIKNIYRYLTIIKSKARRLLKDAGIEELYKEYNTEKVNYIIGKDGKLYPTYNIDNTPKDNDSEDSSSRRRAI
4A4C Chain:A ((34-74))
---------------------KNSPPYILDLLPDTYQHLRTILSRYEGKMETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIF
General information:
TITO was launched using:
RESULT:
Template:
4A4C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2987 for 167 contacts (-17.9/contact) +
2D Compatibility (PS) -4021 + (NN) 384 + (LL) 2592
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -6982.0 ( -41.81 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_4A4C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A4C-query.scw
PDB file :
Tito_Scwrl_4A4C.pdb
: