Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVRLIPDNLNIKFSKYRKLTALISIILVIFSLFIVVLRGVNLGIDFTGGILMEIKSSSEDHAVLNILKENGFTIQSSKAGNNLVMYFREEGNEGKIKKIKSVLEEKLGSSISYRKIDYIGPRISSTQILEGILSMFIAIVGIFFYVWFRFNWQCGFGGTIALIHDVILTVGFVSLTGIKFNISSVAALLTVIGYSINNSVVIYDRIREYQKSGKNRQMSDIVDASIN--VTLFRTVLTSGTTLLATIPLTLICTDTVRDFSLIIFFGILIGTCSAIFISAPILTCKVLISRIAV |
2PJ0 Chain:A ((180-258)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRNNLSSIKAYLTIHSYS---QMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETML |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21012 for 443 contacts (-47.4/contact) +
2D Compatibility (PS) -8161 + (NN) 413 + (LL) 13892
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -18318.0 ( -41.35 by residue)
QMean score : 0.041
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