Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVITIASAVAEVERMSILLSQVKHETLLTMQVLNEHKSLSRSLVEKLNKKEDDNLSTKDISIYMTHLLLEHYN------VKMHCICENNLLEIGLTLT
2PLW Chain:A ((111-167))
--------------------------------------LSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM
General information:
TITO was launched using:
RESULT:
Template:
2PLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1505 for 284 contacts (5.3/contact) +
2D Compatibility (PS) -5283 + (NN) 1220 + (LL) 4444
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -2114.0 ( -7.44 by residue)
QMean score : 0.035
(partial model without unconserved sides chains):
PDB file :
Tito_2PLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PLW-query.scw
PDB file :
Tito_Scwrl_2PLW.pdb
: