Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAE--VSNISNLKALDI-EKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEIYNFQLGLSYVPGKNNL-----QYNNLVASGLSYKNGLSDDISFTTTLTGEFARGDLADCTNKNPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKLDSEVSSTYYMNAGVAYRSDS-RKLSLTYFSGGQDIIGKGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKV-------------MNNNSGYILLAGLKLIF |
| 2FGQ Chain:X ((3-332)) | ------------------------SVTLFGIVDTNVAYVNKDAAGDS-RYGLGTSGASTSRLGL---RGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSLS-GNFGEVRLGRDLVPTSQKL-TSYDLFSATGI-GPFMG-FRNW---------AA---G-----QGAD-D--NGI---RANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGYVAYDN---GP--LSASLGLAQQKTAVG----------GLATDRDEITLGASYNFGVAKLSGLLQQTKFKRDI--GGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKA---IDSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19940 for 2472 contacts (8.1/contact) +
2D Compatibility (PS) -32165 + (NN) 546 + (LL) 4256
1D Compatibility (HY) -800 + (ID) 2050
Total energy: -10273.0 ( -4.16 by residue)
QMean score : 0.139
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