Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAETWALLILTLLEIILSIDNLIFISLAIDRVPNALRERVRIVG-FALALQM-RFVTLFFTSY--ILSMQKPIFYAASFNISVKDLLMIAGGLFLIIKSFIELWNDIFSRKQVEKKIDIKSQLLLAVLQIILIDLVFSVDSLLTAIALTHSMVIIAIACVFSILAMIFLSSYTAQLIKSSSSLKIIAILFIVLVGVHLMLDGLHVELPKEYLYSSLTFALFVEVTSSIKKKVRCIKKKKQF |
| 4GBY Chain:A ((313-386)) | ---------IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27914 for 412 contacts (-67.8/contact) +
2D Compatibility (PS) -7598 + (NN) -4683 + (LL) 8632
1D Compatibility (HY) -8400 + (ID) 1250
Total energy: -41213.0 ( -100.03 by residue)
QMean score : 0.070
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