Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWYSIVEDPKGFTLNIINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECDLGDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKG-EEVVMKNLEGKILASLGYNMCAI
1TVI Chain:A ((16-136))
--------------------NLKEKLEEIVKK-E--IGDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLMEE---DVYGEIYVCPLIVEENAREFNNTFEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGEWRSN
General information:
TITO was launched using:
RESULT:
Template:
1TVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56650 for 853 contacts (-66.4/contact) +
2D Compatibility (PS) -12478 + (NN) -3798 + (LL) 1780
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -78096.0 ( -91.55 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1TVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVI-query.scw
PDB file :
Tito_Scwrl_1TVI.pdb
: