Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HP--KYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGH--HEGNVIMGQK--GMH-LNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHFKQSRDVLTQSAAWTS---YG-DLTIKPSGYQEITTLVKQHHLF-NPPAYDDFVEPSLYKEASRS |
3KSX Chain:A ((25-313)) | ------------------------------AAEPAQLRIGYQKAVS--SLVLAKQ--HRLLEQRFPRTKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKSALRTVADL---KGKRIAFQ-KGSSAHNLLLRVLAKSGLSMRDITPLYLSPANARAAFAAGQVDAWAIWDPWYSALTLDGSARLLANGEG--LGLTGGFFLSSRRYATAWGPFVQQVMGTLNQADGLLERDRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVLVAPAVWRA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81143 for 2369 contacts (-34.3/contact) +
2D Compatibility (PS) -29391 + (NN) -12592 + (LL) 3544
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -132032.0 ( -55.73 by residue)
QMean score : 0.543
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