Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKIT--KRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFD--STKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLK------YGGEVKNR---NDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEK-SNEKTQFEVTYTRNQDILKNRPG-IHYAPPILEKNKDGQRLIVT--YEVDWKNKTVKVVDKYSDDNKPYKEG |
| 1PVL Chain:A ((15-299)) | -----------------------------------------------------------------------KITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAAGNIYSGYTKPNPKDTISSQFY-WGSKYNISINSDSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDINISNGLSGGG---KSFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKIMNNGWGPYGRDSYHSTYGNEMFLGSRQSNLNAGQN----FLEYHKMPVLSRGNFNPEFIGVLSRKQNAAKKSKITVTYQREMDRYTNFWNQLHW---IGNNYKDENRATHTSIYEVDWENHTVKLIDTQSKEKNP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10274 for 2107 contacts (4.9/contact) +
2D Compatibility (PS) -28366 + (NN) -6090 + (LL) 3680
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -38302.0 ( -18.18 by residue)
QMean score : 0.264
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