Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSAKLIDHTLLKPESTRTQIDQIIDEAKAY--HFKSVCVNPTHVKYAAERLAD---SEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGR----FDDVQQDIEAVVKAAKGHTVKVIIET-VLLDHDEIVKASELTKVAGADFVKTSTGFAGGGATAEDVKLMKDT-----VGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
1JCL Chain:A ((10-217))
LRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKA--CKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64134 for 1581 contacts (-40.6/contact) +
2D Compatibility (PS) -21714 + (NN) -7359 + (LL) 1628
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -105229.0 ( -66.56 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1JCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JCL-query.scw
PDB file :
Tito_Scwrl_1JCL.pdb
: