Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFKLSDEQENEIEALLDQ-ENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIVLDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAE---KVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMD-YNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSL----INVRVTD--KYRVEENV--DVK------EVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLDK |
| 1PCM Chain:X ((19-444)) | ---------IRGVVGDTLTAETAYWIGRAIG---SESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQ---IQALRERIEKNDLASGVGS--VEQVDILP---RYFKQIRDDIAMA-KPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGAD--IIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYP-KGWGLVRASNTTPVLVLRFEADTEEELERI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108984 for 3691 contacts (-29.5/contact) +
2D Compatibility (PS) -43721 + (NN) -20099 + (LL) 2220
1D Compatibility (HY) -28800 + (ID) 6250
Total energy: -205634.0 ( -55.71 by residue)
QMean score : 0.538
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