Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFEMRKIAFNAPKAFSLEHEGVVLEGEIVRVGAKLFRLKARLKGELMLICDTSGKEFKKSLDESLVLHISDGLWDTQSQSLDFDNLDVIESFNGFIDLSEILRSEVESIKLDYHYAD |
1HA8 Chain:A ((20-33)) | ----------------------------------------------GTGPCANCLAGYPAGCSNSDCTAFLSQCYGGC---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1213 for 46 contacts (26.4/contact) +
2D Compatibility (PS) -1354 + (NN) 460 + (LL) 6384
1D Compatibility (HY) 800 + (ID) 50
Total energy: 7453.0 ( 162.02 by residue)
QMean score : 0.225
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