Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIFGELGSLGHLFKKTQELEILHGYLQDVMQKGSEANQRVLNLAINTEFQVPLEHGIFSIEQSYCLEHAKEGEKGFFESHRQYVDFQLIIKGVEGAKVADINRAVIKTPYDEKRDLIVYEPVSEASFLHLDAGMLAIFLENDAHALRFYGESFEKYREEPIFKAVVKMPKGLIKLKL |
| 3GBG Chain:A ((24-71)) | -----------------------------------------------------------------------------NLYIN-DYKMFWIDSGIAKLIDKNC-----------------------LVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10784 for 243 contacts (-44.4/contact) +
2D Compatibility (PS) -4884 + (NN) 3186 + (LL) 7524
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -7508.0 ( -30.90 by residue)
QMean score : -0.130
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