Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFFKFILCLSLGIFAWAKEVIPTPSTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISLAQDMYTPSLANRKLVHLHDNHPYGGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIFELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETR------------GIA-NLEYFVYASEIGAAMMWRSLRVAFTITDISKTFQSQPKHHQIGTLELNFAF |
| 4J3U Chain:A ((561-631)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRIRDAINGGNPFGNPLQQGFNTGLF--LEP-NGFYQGNEADTRRSLATYADQIQIGLAGNLRDYVLISHTGEAKKGSEIHTFDGLPVGYTASPIETINYVSAHDNETLFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2282 for 281 contacts (-8.1/contact) +
2D Compatibility (PS) -5736 + (NN) 2670 + (LL) 14572
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: 5274.0 ( 18.77 by residue)
QMean score : 0.025
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