Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRMKPIFLLIFLLLASLIAREKDASSNLFDLIDKGINREQELKEQEQKTRLKLAQ--------SPLVALEIVPQETP-----YLEWQGARESYYLKVSAVVESVVILKIDINQGRSCSLYPTPKSVSLVRNQSVAYEILCENQPLWIEVSTNLGKRTFQF
3HQT Chain:A ((271-382))
VNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGLTIRSESQIIGLETGDERNTEKVRDYLESNGVFGSVFCR-PATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYGDFYFR---------------------
General information:
TITO was launched using:
RESULT:
Template:
3HQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19258 for 477 contacts (-40.4/contact) +
2D Compatibility (PS) -10106 + (NN) 2801 + (LL) 960
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -32453.0 ( -68.04 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3HQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HQT-query.scw
PDB file :
Tito_Scwrl_3HQT.pdb
: