Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPL-DLRRLEKLH--FDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNIVGSNESPENVYGFSKLCMDEFVLSHSSD---NVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSGVYNVGYSQARSYNEIVSILKEHLGDF-KVSYIKNPYTFFQ----KHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 3RUD Chain:A ((26-343)) | ----------KTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF------STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHI-----KYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFLK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148588 for 2509 contacts (-59.2/contact) +
2D Compatibility (PS) -31420 + (NN) -12080 + (LL) 1264
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -214374.0 ( -85.44 by residue)
QMean score : 0.466
|
|
|