Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMNEIIAVANQKGGVGKTTTAVNLAASLAAHEKKILLIDFD-PQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALGSVVKLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLA----ELFKYFDSEFFRDSATGEYIM-------IPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG |
| 1G3R Chain:A ((1-233)) | -MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGV--DDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLP---GAVDWEHVL--KADPRK-----LPEVIKSLKDKFDFILIDCPAG---LQLDAMSA-------------MLSGEEALL--------VTNP--EISCLTDTMKV-GIVLKKAGLAILGFVLNRYGRSDRDIPPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89086 for 1962 contacts (-45.4/contact) +
2D Compatibility (PS) -23232 + (NN) -4511 + (LL) 3084
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -129595.0 ( -66.05 by residue)
QMean score : 0.378
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