Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL
3U0R Chain:A ((25-58))
-------------------------------------------------------------------KDAYQVILDGVKG-GTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTD
General information:
TITO was launched using:
RESULT:
Template:
3U0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4229 for 169 contacts (-25.0/contact) +
2D Compatibility (PS) -3940 + (NN) -2672 + (LL) 4052
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -9239.0 ( -54.67 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_3U0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U0R-query.scw
PDB file :
Tito_Scwrl_3U0R.pdb
: