Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNGEKVDFFLALWRFVLWVLSMGLLVGFVAPFIFKFFLHDKFSSTHIEIIKEEI |
2PFX Chain:A ((1-18)) | -----------------------------------------------------------------------------------GMTKPKEPTALDLPMADPLPDETQKYFEICQEKLGMVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331 for 47 contacts (-7.0/contact) +
2D Compatibility (PS) -1897 + (NN) -964 + (LL) 7780
1D Compatibility (HY) 400 + (ID) 50
Total energy: 4938.0 ( 105.06 by residue)
QMean score : 0.063
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