Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNIKKRLSDWEYQWAVALVYTICISINARIFYDIDGSASDSIFDPKNSYYMWLVGLIAALLSNLLFDPRGRDCYKSFQ------VRYPRFLKAIFKARFF--GAFYNAVLGSRLRDFYVMLLTMPFIAAIHEISAYCGHPSNFLVEGLVMLGLVCVFGICSRLCAKLGW---------------------------------------------------------- |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTIL-------MSVEAFSEGLLETARIA--GIDEFLAVQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFAKRKEIVESFRTVKRLISLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -51658 for 713 contacts (-72.5/contact) +
2D Compatibility (PS) -15430 + (NN) -1318 + (LL) -116
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -76322.0 ( -107.04 by residue)
QMean score : 0.060
|
|
|