Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFGDVTSPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLIVSLLSAGVYGLARIPAVNDLPVL--DKIGFCQRISFFFNYLPIVVFGIDRIRKP |
1AVL Chain:A ((590-623)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1788 for 87 contacts (-20.6/contact) +
2D Compatibility (PS) -3304 + (NN) -772 + (LL) 14400
1D Compatibility (HY) 800 + (ID) 50
Total energy: 9286.0 ( 106.74 by residue)
QMean score : 0.102
|
|
|