Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHRLLGRVMLLLGALGVILTMSFSYVAAAEKPNIDKPVKGLEQTEKAIVADDYNKAKDAFQEDKLWWSENKQVVKEKSYDLAGQIDRQIAEISLGILNNDKQQAMDGITSLHNLLKTYQ---DGTYTDNEGNTNITLSSYIAKLTATKKLVDEKEW-AKAATQIQDLKTEWLAVE-----GDVVSQSQAAYDNTERDLMLLDAYINDPAKQAKTADVLDGMTEELKPFADVTYTWFDAALIPFREGLEALLIIATLLTYTKRTKTRTAKRWIIGGTAAGLVVSLALGMIVAFWLSALAFGDNNNLINGWAGLIASIMMLYVSYWLHRNSDITRWNNYMEGKSNQALSNGKMISFAFLAFLAILREGLETVVFLIGMVGRMSNFELLMGILAGLGVLLIIAFVMLRYSVHIPVKPFFMISSAIVFYLCFKFMGSGIHSLQLAGVIPTSVEDYLPSIPALSIYPSWYSFLPQVLLVIFGLTILIKQQIKKKS |
| 4OER Chain:A ((269-355)) | -------------------------------------------------------------------------------------------------------HAVDKDTMIATVLYGTQKRADTLFADNVPYANIGLKPYAFDPALAARLLDEAGWTAKASGDIREKDGQPLAIELCFIGTDAISKSMA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5606 for 358 contacts (15.7/contact) +
2D Compatibility (PS) -7767 + (NN) 873 + (LL) 33264
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: 27426.0 ( 76.61 by residue)
QMean score : 0.248
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