Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATKAENKMWRIKSDPAHVAFLPASGVDAANLANNHTMDYFQV-GYDDTLKAFKENNIPVFNAD-APLETTIKGMKTVLLGYDCRMSQQSPAY-LERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLE--SVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF |
| 2Z06 Chain:A ((1-194)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------MRVLFIGDVMAEPGLRA----------------VGLHLPDIR---DRYDLVIANGENAARGKG----------LDRRSYRLLREAGVDLVSLG-NHAWDHKEVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALD-RLLE-EEKADYVLVEVHAEAT------SEKMALAHY-LDGRASAVLGTHTHVPTLDATRLPKGTLYQTDVGMT--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41194 for 1577 contacts (-26.1/contact) +
2D Compatibility (PS) -20014 + (NN) -6075 + (LL) 17584
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -57749.0 ( -36.62 by residue)
QMean score : 0.246
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