Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLLQEMKLTDAHTENAGSVLGSSSAL----DMI-GIQEAYLKTNRLGIPLVFMADVIHGYK-----TVFPIPLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFLNSELGKAMVDGYQGDASK-------LDGNFDRMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQNYLPAYHAAIQAGAKLVMTAFNVVDGVPATMNKWLNRDVLRGEMDFDGVLISDWGAVAEVINHGTARNPKEAAQFSMEAGVDLEMMTTCY---IHELKGLIEEGKLSESLLDEAVLRMLHLKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGVESAVLLENKNR-----LLPLAKET-KIALVGPLASSPDI-LGGWNVYGEEKDG-INVETGLREVFETVEVISTEYTEFSDEDKVAVKAAVQNMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLEKPVVITLFNGRPLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYNHLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGEPLHVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVTFELTSEAFSFYNHQLEKVQEPGLHRIFVGTSSEDVDAFELEVGGYV |
3WLH Chain:A ((13-596)) | --EDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLL----------SGGGSVPRKGATAKEWQDMVDGFQKACMST-RLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGI-DRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPY---ADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSG--GFSYAIVAVGE-HPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATV-LISGRPVVVQPLLAASDALVAAWLPGSEGQGVT-DALFGDFGFTGRLPRTWFKSVDQLPM--------------NVGD---AHY-----DPLFRLGYG-------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219199 for 5289 contacts (-41.4/contact) +
2D Compatibility (PS) -58876 + (NN) -18355 + (LL) 12132
1D Compatibility (HY) -36000 + (ID) 9100
Total energy: -329398.0 ( -62.28 by residue)
QMean score : 0.468
|
|
|