Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNMEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETGLFSVMWSEHCSYK--------NSKP--------VLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAF-------------------KVESHNHPSYVEPYQGAATGVGGIIRD--VFSMGARPIAML-----NSLRFGELDTPH------------AKYLVSEVVAGIAGYGNSIGIPTVGGEIQF--DPCYTKN---------PLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTGRDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKL---LLEACLDVIRDHSDILVGIQDMGAAGLVSSSSEMASKAGAGLELIMDDVPQRELHMTPYEMLLSESQERMLLCVKKGHVEEIQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPTRYQAFQEEEAFVPAMD----DVVGVWKELLAQPTIASKRHIYEQYDYQVR----TDTAV----VPGSDAAIVRVR-GTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSG-GKPLAITDGLNF----GNPEKPEIFWEIEKAADGISAACLELDTPVISGNVSL---YNETDGTGIYPTP---VIGMVGLVEDLAHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGRAPE--LDLVTEKKYQQLLLTAIQEGLVASSHDLAEGGFGVALAEATFKAGLGAEVEVPF----ALNQLFSESQSRFLVSVKPEN----EAAFAQLMELEKVYRLGVVTEDDTIRVKHKEDQVTAKT-TELRSIWEGAIPCLLK |
| 4MGH Chain:A ((205-991)) | ---------------------------------LGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQPKSLFKMIKNTFETTPDYVLSAYKDNAAVME-GSAVGRYFADHNTGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIV-VGAKLIVLGGPAMNIG------------------FASVQRDNPEMERRCQEVIDRCWQ-LGDANPILF-IHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSL--HDNHFDNQPI-----DLPLDVLLGKTPKMTRDVQTLKAKGDALNRADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVGKDSMSMKTRWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDNALLLIDLGKGHNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAMQALVAARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDIAALGDDHLAALFNEELGG-VIQVRAEDRDAVEALLAQYGLADCVHYLGQALAGDRFVITANDQTVFSESRTTLRVWW--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134279 for 5885 contacts (-22.8/contact) +
2D Compatibility (PS) -69327 + (NN) -10541 + (LL) 5524
1D Compatibility (HY) -22800 + (ID) 9850
Total energy: -241273.0 ( -41.00 by residue)
QMean score : 0.370
|
|
|