Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYKTKQSLDQLVQNGSTPGISYQIKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNN-VTILHLLTHSSGL--------AQNIPNF-SMNNR----EDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKLDG-NYEKAIQNNILEPLIMTNTSFHPVNKKQVIPTEL-------DQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQLGAPILSEKTWQLMQINHTPGLNRSRGLGWDLR------GESVLYHTG-----FTGTFMVLDLKRQASLIVLSNRVHPSRANPNFVDKRDSIVDTFIEEVSNTKEV |
| 1CEF Chain:A ((53-324)) | --------------------------------------------------TTTDRFRVGSVTKSFSAVV-LLQLVDEGKLDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFY--VHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAG----AVISSTQDLDTFFSALM---SGQLMSAA--QLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKR--SVTALAN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132745 for 1948 contacts (-68.1/contact) +
2D Compatibility (PS) -25803 + (NN) -14420 + (LL) 5944
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -188674.0 ( -96.86 by residue)
QMean score : 0.483
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